Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETR-SKAGDFLSLCKNTEFACEVTLQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVE------GGSSKEFRFTKQMMYAQPEVLHALLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDG----RRIPVIVFTKGGGQWLEPMITTGADALGLDWTTPLNTARNV-VSGRVALQGNLDPAVLYGS-AASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYSAKYLG
3CYV Chain:A ((3-352))--ELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQA-GDFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGSSKAFTVI------KKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLR---ENDGRRVPVTLFTKGG-GQWLEAMAETGCDALGLDWTTDIADARRRVGN-KVALQGNMDPSML-YAPPARIEEEVATILAGFG---HGEGHVFNLGHGIHQDVPPEHAGVFVEAVHRLSEQY--


General information:
TITO was launched using:
RESULT:

Template: 3CYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1957 -29696 -15.17 -88.12
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -15.17
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_3CYV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CYV-query.scw
PDB file : Tito_Scwrl_3CYV.pdb: