Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTITLPALPYGYDDLAPHISKETLEYHHDKHHNTYVVNLNNLIKGTDLEGKTLEEIIKATAGDASKAGIFNNAAQVWNHTFYWNSMKPNGGGKPTGAIAAKIDEAFGSYEKFAEEFTAAATTQFGSGWAWLVADEVNGKLSITKTSNADTPLA-HGQIAVLTIDVWEHAYYIDFRNLRPKYIATFLENLVNWDYANAKLAGQPAGVEK
4L2C Chain:C ((4-192))-----LPSLPYAIDALEPHISKETLEFHHGKHHNTYVVKLNGLIPGTKFENKSLEEIVRSSDG-----GVFNNAAQIWNHTFYWNSLSPNGGGAPTGAVADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLVK-LADGSLDIVNTSNAATPLTDDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFW-SLVNWEFANANFA--------


General information:
TITO was launched using:
RESULT:

Template: 4L2C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 900 -73508 -81.68 -391.00
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain C : 0.88

3D Compatibility (PKB) : -81.68
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.597

(partial model without unconserved sides chains):
PDB file : Tito_4L2C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4L2C-query.scw
PDB file : Tito_Scwrl_4L2C.pdb: