Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVEWLLRLEPWQQALAGTAFTYFMTALGAGLVFFFKEIKKEVLNLMLGFASGVMIAASFWSLLDPAITKAEENGDIAWLVVSIGFGLGGVFLYMADKTLPHMHFGPQHEAEGLPTHLKRTILLVFSITLHNIPEGLAVGVAFGAAATADNPTAAILAAVSVALGIGIQNFPEGAAVSIPLRQEGLSRKKAFVYGQASGIVEPIAGVIGALLVTKVELLLPYALAFAAGAMIYVVVEELIPEAQQTLSSKRHFAVFGVMSGFIIMMILDVALG
4RVY Chain:K ((10-23))------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLPEAYAIFDPLVD------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RVY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain K - contact count / total energy / energy per contact / energy per residue : 13 -2761 -212.38 -197.21
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain K : 0.40

3D Compatibility (PKB) : -212.38
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.40
QMean score : 0.413

(partial model without unconserved sides chains):
PDB file : Tito_4RVY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RVY-query.scw
PDB file : Tito_Scwrl_4RVY.pdb: