Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNKTIILGGFTEMKKAKLFGLGAVALAAGLFLGACGNNGSTDSSGGKSSSDTTTAALITDTGGVDDRSFNQSAWEGLEKWGKDQGLSRGNDG-FQYFQS-SNESDYIPNIDQALNAGFKTIFGIGYKLKPAIQEQATNNTGTNFVIIDDVIDGLDNVVSATFKDNEASYLAGVAAAYTTETNVVGFIGGVKG-E-VIDRFDAGFKAGVDAGAKELGKEIKVLNQYAGDFSAPDKGRSIAQGMYA--QNADIIFHASGGTGNGVFQEAKSLNESGDKKVWVIGVDRDQSDEGEYTLNGEKKNFTLTSTLKAVGTVVEDLAQKSADGKFPGGEHTVYGLKEDGVGLTEGQLSDEAKKAVDEAKEKIISGDVKVPETPEEN
2FEP Chain:A ((16-263))----------------------------------------------------TTTVGVII-PD--ISSIFYSELARGIEDIATMY------KYNIILSNSDQNMEKELHLLNTMLGKQVDGIVFMGGNITDEHVAEF-KRSPVPIVLAASVEE-QEETPSVAIDYEQAIYDAVKLLVDK-GHTDIAFVSGPMAEPINRSKKLQGYKRALEEA-N---LPFNEQFVAEGDY-TYDSGLEALQHLMSLDKKPTAILSATDEMALGIIHAAQDQGLSIPEDLDIIGFDNTRL--------SLMVRPQLSTVVQPTYDIGAVAMRLLTK------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2FEP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1326 26501 19.99 109.51
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 19.99
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_2FEP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2FEP-query.scw
PDB file : Tito_Scwrl_2FEP.pdb: