Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRRFAIN--GYGEAQD-VFEEIDAHPR-EVGSGHVRVEIKAFSVNPYDVALRLGEMKEI--RTLKFPYVPGNDGAGIVTEIGSDVTTVHVGDRVAVHA----------------------------VGGTYGEEVVLPSAKVAKIPDKMSWEEAAGMVTPGITAYNLINHLT--EIQPTDTVMILGASGAVGSSLIQLLHEKGIRILTSASS-KNEEKVKKLGASAFAAYDKTNP----------------------GL---QF---ADQADLVIDATKGSIKGETGIQIMKPGGRYVALNDLPDLD--LRQ---KKEGFYE-SFVPRKEYLDAEAFAGIIKAYQKGAFHVFISMNLSASLKHVIQAHQLVEG-HPPAGKIILSFEK
4GI2 Chain:A ((35-411))MYAWAIRRERHGPP-EQSHQLEVL-PVWEIGDDEVLVYVMAAGVNYNGVWAGLGEPISPFDVHKGEYHIAGSDASGIVWKVGAKVKRWKVGDEVIVHCNQDDGDDEECNGGDPMFSPTQRIWGYETGDGSFAQFCRVQSRQLMARPKHLTWEEAACYTLTLATAYRMLFGHAPHTVRPGQNVLIWGASGGLGVFGVQLCAASGANAIAVISDESKRDYVMSLGAKGVINRKDFDCWGQLPTVNSPEYNTWLKEARKFGKAIWDITGKGNDVDIVFEHPGEAT-FPVSTLVAKRGGMIVFCAGTTGFNITFDARYVWMRQKRIQGS-H---FAHLKQASAANQFVMDRRVDPCMSEVF--PWDKIPAAHTKMWKNQHPPGNMAVLVN-


General information:
TITO was launched using:
RESULT:

Template: 4GI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1573 -4164 -2.65 -13.65
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -2.65
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.527

(partial model without unconserved sides chains):
PDB file : Tito_4GI2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GI2-query.scw
PDB file : Tito_Scwrl_4GI2.pdb: