Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMLKEITFSVFFLQFIEKSLYFASYSFFVTIRNGTSKKMKKQGTRYMEKKQKIILGATSALTIVILILSLFFVIRSSTKKEPIIPEKKITEKAKEPTDDKQQLVTQAKNLAQSYDYDQAIALLEKDSKNGSTETQQLLQTLKKEKEQLIDWSDPTQISHVFFHSLIVDPQKAFHSQQAQGYKDYMVTVEEFNRSIEQLYQNDFVLVNLNDLIQKDEQGNLSFNGLALPEGKKPLVLSQDDVSYYEYMDNSGFPSRLVVSNNNEIKNVYKEKDKEEIGDFDMVPLIDAFVKKHPDFSYRGAK-GTLALTGYNGVLGYRTSKSQYGDNEKTKKEIKEAKKVAEQLKKDGWSFASHTWGHLNMTQASLEDVKKDNELWQQEVAPILGK-TNILIYPFGADISDWQPYSAENQKFAYLKSQGFDIF-CNVDASTPAWGQLGTDFYRNARINIDGIRFQSDLDGKNPILDPFINVHDVYDKEARESA
4M1B Chain:A ((56-182))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKQVAFTFDI----------SWGDKKAI---------------------PILDTLKER----------DIKNATFFLSAAWAE---------------------RHPDVVERIIKDGHEIGSMGYNYTSYTSLETNEIRRDLLRAQDVFTKLGVKQIKLLRPPSGD-------FN--KATLKIAESLGYTVVHWSNNS------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4M1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 540 5109 9.46 41.20
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 9.46
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.323

(partial model without unconserved sides chains):
PDB file : Tito_4M1B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M1B-query.scw
PDB file : Tito_Scwrl_4M1B.pdb: