Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILEYSDQLWVPQIKSWRLNERHYGKLQGLNKKETAEKYGDEQVHIWRRSYDTLPPLMEETDEGSAANDRRYAMLDKRDIPGGENLKVTLERALPFWQDEIAPALLDNKTVLVAAHGNSLRALAKHIEGISDEDIMDLEIPTGQPLVYELNDDLTVAK-KYYL
1QHF Chain:B ((66-228))IALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPPIDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHGNSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKPSKPSYYL


General information:
TITO was launched using:
RESULT:

Template: 1QHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 538 -35630 -66.23 -219.94
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.86

3D Compatibility (PKB) : -66.23
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.506

(partial model without unconserved sides chains):
PDB file : Tito_1QHF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QHF-query.scw
PDB file : Tito_Scwrl_1QHF.pdb: