Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKYEILAQIGDGTFGSVAKAVSKKTGQLVAIKKMKQKFYTWEECVKLPEVDVVRRIHGHPNVVKLREVIRENNELFFVFEYMDGDLLGVIKKAKQQGGPPASTPSAAPLIPYPLVKNYMRQMLQALVYIHKRGYFHRDMKPENLLIRKEASGDEVLKLADFGLVKEICARP-PFTDYVSTRWYRAPELLLQDRFYGAAVDVWAAGCIMAELITMRPLFPGTNEVDQLFKIMSVLGSPTEEVWAGGLRLAKKIRYTFPKVAGSGLAQALPSHIPLPALDLLRQMLVYDPKVRLTAEQCLQHPFFNVGIDECNAPSAAALDQLALMAKRMLPGSKTAPPALKSPTAGQVAALKAARASTDASLSDTSSRKFYLLGTLKDPAPSLPKLPVALSTSPPSLDAPPNASSPLRGRGALSPAGMPVLANGHQCPSLTTTVAKGKRRSQETADTSLAKKLAGLKNVPTGKGKLPVSYALPAASAVHSPRAAPNLKVSASVARPYPLAPTANNRDAVASPRHHNPYKEAETTSPTAASAAAKVEIDLDELMEEFASEMTAMGVLAQRHDSGASAESKSESYVSQPALPPDPVATLLNNSRYRRKSTTSADPLLKGNNSPRATHQLDTRKVDDVAAKSDLPRIDHSAPKGMSPSLKALLAKHKTSGLAFP
1UA2 Chain:D ((13-297))----EKLDFLGEGQFATVYKARDKNTNQIVAIKKI--------NRTALREIKLLQELS-HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNS-------------LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE----NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFK--SFPGIPL-HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1UA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1399 -133357 -95.32 -490.28
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain D : 0.66

3D Compatibility (PKB) : -95.32
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.491

(partial model without unconserved sides chains):
PDB file : Tito_1UA2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UA2-query.scw
PDB file : Tito_Scwrl_1UA2.pdb: