Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKIFSTNTCPVPNDLESVIHHKDEVPAELCGMSEQQVQKIWKSIESLYKTGNYPLITFCLRRQGKILLNRSIGYAQGNSPAGLQENALIATPDTPVCLFSASKMITAMLIHLLDEKGEINLLDPVSYYIPEYGVN---GKRRATIFHLLSHRGGIPYVDGDVTPELLFDKDEILRRLYAARPVSPAGNHLAYHAVTAGYILGEIIERVTGQDLRKFVHETIEKPMDMPYFNYGLKPEYRAEVALNCATGLHPRLGTDHYLNHVLGGGLQLAVDVTNDSRFMDTICPAGNIYTSAEQAGRFFEMLLSGGSYQGKQILSEKTIFRATLPTTGVNIDRTLLIPMRYALGPMLGSNPVGLFGPMTGQAFGHLGFS---NILCWADPERDISVSLLTTGKSVVGTHLPALANLLYQISIQCPRIPRDQRRSLFGSDSHETDLV
4GDN Chain:C ((5-329))-----------------------------TRLTNDSQQQIDKIIEHDLQKGHIPGASILIVKNGKVFLNKGYGYQDVDK-------KVKASPTTKYEIASNTKAFTGLAILKLAQEGRLNLNDDVSKHVPHFKMNYNGQNETITIKQLLAQTSGIPSDITS------NRLNDVTRAIMGDELHHKPGEEFEYSNMNY-DLLGLIIQNVTKQSYTKYITNSWLKPLHMTHTSFKQTNNKSKHDAIGYELQGST--------------------PVVSKPEFNLWDTPSAYMMTSTEDLEHWIKFQLNPPDK------YKSLVQQSHKNLSSTIG---EPNANAYASGWFTNN---------DEHLVFHSGTLDNFSSFILLNPKQNYGIVVLANLNSEY----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4GDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1731 -27976 -16.16 -89.95
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain C : 0.67

3D Compatibility (PKB) : -16.16
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_4GDN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GDN-query.scw
PDB file : Tito_Scwrl_4GDN.pdb: