Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDSQQSKPKHVMMMAAGTGGHVFPALAVAKQLQQQGCQVSWLATPIGMENRLLKDQNIPIYQIDIQGV-RGN------GVI-------RKLA----A-PFK-ILKATFSAMRYMKQLKVDAVAGFGGYVAGPGGLAARLLGIPVLIHEQNAVAGF---------TNAQLSR-------VAKVVCEAFPNTF--PA-SEKVVTTGNPVRREITDILSPKWRYDEREQAGKPLNILIVGGSLGAKALNERLPPALKQLQVPLNIFHQCGQQQVEATQALYADAPANLTVQVLPFIEDMAKAYSEADLIICRAGALTVTEVATAGVAAVFVPLPIAVDDHQTANAKFLADVGAAKICQQSTMTPEVLNQLFTTLMNRQLL-TEMAVKARQHAQPNATQHVVGLIQKM
4G2T Chain:A ((14-396))--------HMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMG--PTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAERWKPDLVLTETYS--LTGPLVAATLGIPWIEQSIRLASPELIKSAGVGELAPELAELGLTDFPDPLLSIDVCPPSMEA--GTTKMRYVPYNGRNDQVP---S----WVF-EERKQPRLCLTFGTRVPL-LLQALSQELPKL--GFEVVVA-VSDKLA---------PEG--VLAAGQF-PLSAIMPACDVVVHHGGHGTTLTCLSEGVPQVSVPVIA----EVWDSARLLHAAGAGVEVP-------SVLAACARIRDDSSYVGNARRLAAEMATLPTPADIVRLIEQ-


General information:
TITO was launched using:
RESULT:

Template: 4G2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1775 -106393 -59.94 -337.75
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -59.94
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_4G2T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G2T-query.scw
PDB file : Tito_Scwrl_4G2T.pdb: