Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRTLSMNYLQDARQHVLQQIRTACELAQREPETVQLLAVSKT----HPSERLREM-YAAGQRAFGENYLQEALDKIDALQDLDIEWHFIGHVQRNKTKHLAEKFDWVHGVDRLIIAERLSNQRG-DDQAALNICLQVNIDGQESKDGCAP-EDVAELVAQMSQLPKIKLRGLMVIPAPDNT-------GAFADAKKLFDAVKVQHAHPEDWDTLSMGMSSDLEAAIAAGSTMVRVGTALFGARDYSQKG
3E5P Chain:C ((12-234))--HIDTQAITENVQKECQRL----------PEGTALFAVVKANGYGHGAVESAKAAKKGGATGFCVALLDEAIELREA-GV-QDPILILSVVDLAYVPLLI-QYDLSVTVATQEWLEAALQQLTPESNTPLRVHLKVDTG--MGRIGFLTPEETKQAVRFVQSHKEFLWEGIFTHFSTADEIDTSYFEKQAGRFKAVLAVLEE------LPRYVHVSNSATALWHPDVPGNMIRYGVAMYGLNPSG---


General information:
TITO was launched using:
RESULT:

Template: 3E5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1044 13106 12.55 62.71
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain C : 0.69

3D Compatibility (PKB) : 12.55
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_3E5P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3E5P-query.scw
PDB file : Tito_Scwrl_3E5P.pdb: