Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSDFLSEHLIYRDDDFMVIHKPSDILSVPGKGDLHDSVLTRLVAIE-PRTLLIHRLDRDTSGILVFGLSKRGQSAIARQFQDRQTSKIYEALVAGHLE-GEGTVDIPVVYDPSRP-PL-HIVD----ASHNKPALTHWQAIEHFQIQGQPVTRVKLTPITGRSHQLRVHMQYLGHPIVGDTLYATPEQL--LVPRLCLHAKQLSFNHPVTGESLTFNCPVPF 5VBB Chain:A ((6-230)) ---VENLSIVYRSRDFLVVNKHWDVRID-------LTLQKQLRYRFP-GFRFCHQLDFSTSGALCVALNKAAAGSAYRCFKERRVTKAYLALLRGHIQESRVTISHAIGRNSTEGRAHTMCIEGSQGCENPKPSLTDLVVLEHGLYAGDPVSKVLLKPLTGRTHQLRVHCSALGHPVVGDLTYGEVSGREDRPFRMMLHAFYLRIPTDT--ECVEVCTPDPF

General information: TITO was launched using: RESULT: Template: 5VBB.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1039 -47552 -45.77 -238.95 target 2D structure prediction score : 0.60 Monomeric hydrophicity matching model chain A : 0.74 3D Compatibility (PKB) : -45.77 2D Compatibility (Sec. Struct. Predict.) : 0.60 1D Compatibility (Hydrophobicity) : 0.74 QMean score : 0.401

(partial model without unconserved sides chains): PDB file : Tito_5VBB.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5VBB-query.scw PDB file : Tito_Scwrl_5VBB.pdb: