Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKHVYRHVCSYFKENKISIFLRPLQYTEIDLIWQQINRRELITQLYLQKQEHLELTDCFYDVKHWDAYHLENDPPKLKELYE-QGALFIGTFDASEQLAGISVVSNQTITD---YPNAKLLQYFYVDADQQGKGIGAKLMQAAKESAKQLEAHQLYISATP-SKRTVDFYIKHGAVVLKHPDRQLWELEPEDIHLLCTL
4E2A Chain:A ((3-172))------------------QVEIRKVNQDELSLLQKIAIQTFRETFAFDNTA--EQ-------LQNFFDEA--YTLSVLKLELDDKESETYFILM-SGKAAGFLKVNWGSSQTEQVLEDAFEIQRLYILKAYQGLGLGKQLFEFALERAQISGLSWVWLGVWEKNVKAQLLYAKYGFEQFSKHSFFVGNKVDTDWLLKKSL


General information:
TITO was launched using:
RESULT:

Template: 4E2A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 620 -34620 -55.84 -209.82
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -55.84
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_4E2A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4E2A-query.scw
PDB file : Tito_Scwrl_4E2A.pdb: