Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWNPNSIIFCFYFIFSILALWGIIEAWVHQSRTETIHPFKAFVHLLAFYLSYLLIPLWFFNLYAGWIGYYSIHETIFIFLLSGILIYARFIEPHMVRVDVHQYRLNPDRHFVKPVKVALIADLHIGLFSGHERQLKIIVKKLNEQQPDLVVVAGDWTYEPEDK-------------LVQELSVLK---DIKAPVYSVPGNHDEQYPGPPIQQLLKDALYYNDVMDIEGK-IVEFDEFRLIGIGDLWAGK-------------T----------DMRSMPDL-PQDKPWLILSHNPDTVDM--------------------------V---PKLPNRPLMLSGHTHGGQVELPLVTNYIMKKVSILGHKRGFYSHEHADVFVTVGTGMVGIPLRFRVPPTIDIIELA
5K73 Chain:D ((6-239))---------------------------------------------------------------------------------------------------------------EQIQHIAIVGCVHGKYREMY-RQLSEYEKS-TGKEISFVICTGDMQTLRYEADLVYLKVPPKYKQMGDFHLYYEGKEKAPYLTLFIGGNHESSNVLLHL---YNGGFVCFNMYYLGVCSCININGLRIVGVSGIYKSFDEKKPYTYPPSPNDVVSLFHTRNYVIQMLSNLSQSSQIDISLSHDWPQGIVMKGNYKQLYRFQPGFKKDGASLGSPINKVILNTLKPKYWISGHMHCEYHA--------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5K73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 761 -51266 -67.37 -312.59
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain D : 0.53

3D Compatibility (PKB) : -67.37
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.354

(partial model without unconserved sides chains):
PDB file : Tito_5K73.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5K73-query.scw
PDB file : Tito_Scwrl_5K73.pdb: