Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLPLYVTSGEPAGIGPDICLSLAKRV--DERPVVVLADRNLLHQRAQKL-GLDIKFLEYSGQAESS--LQGELYIEHV-P-LETIVVDGQLNAANAAYVLEQLRRSADYAMSGKSVGVATAPVQKSVINDAGILFSGHTEYYQEFAGVERVVMMLATKTLRVALATTHLPLRDVADAITKERLHQVIDILLRDLKTKFKINDPRVLVCGLNPHAGEDGYLGREEIDTINPVLESYRSQGVKLSLSLPADTLFTPEHLKNADAVLAMYHDQGLPVLKSQGFGEAINITLGLPFIRTSVDHGTALSLAGTGLAKSSSLNVAADLALSLAAS
2HI1 Chain:A ((3-327))TKTVAITMGDPAGIGPEIIVKALSEDGLNGAPLVVIGCLATLKRLQAKGITPNVELRAIE-RVAEARFAPGIIHVIDEPLAQPEALEAGKVQAQAGDLAYRCVKRATELALRGDVQAIATAPLNKEALHLAGHNYPGHTELLATLTHSRDYAMVLYTDKLKVIHVSTHIALRKFLDTLSTARVETVIGIADTFLKR-VGYVKPRIAVAGVNPHAGENGLFGDEETRILTPAITDARAKGMDVYGPCPPDTVFLQAYEGQYDMVVAMYHDQGHIPLKLLG-YDGVNITAGLPFIRTSADHGTAFDIAWTGKAKSESMAVSIKLAMQLA--


General information:
TITO was launched using:
RESULT:

Template: 2HI1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1820 8002 4.40 25.24
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 4.40
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_2HI1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HI1-query.scw
PDB file : Tito_Scwrl_2HI1.pdb: