Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKRGDIYFADLSPVVGSEQGGTRPVLVIQNNLGNHF-----SPTIIVAAITAKMAKPKLPTHIGIKATGTGIERDSVILLEQIRTIDKSRLKEKVCHLDRPIMAEVDRALKISVGIEALTPVTK
5HJZ Chain:A ((3-117))-MRRGEIWQVDLDPARGSEANNQRPAVVVSNDRANATATRLGRGVITVVPVTSNIAK-VYPFQVLLSATT-GLQVDCKAQAEQIRSIATERLLRPIGRVSAAELAQLDEALKLHLDL--------


General information:
TITO was launched using:
RESULT:

Template: 5HJZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 509 2477 4.87 22.72
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 4.87
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.558

(partial model without unconserved sides chains):
PDB file : Tito_5HJZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HJZ-query.scw
PDB file : Tito_Scwrl_5HJZ.pdb: