Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGSQLHSATAAATMTSTAVSSASAEPSPPTGSSSTAIMSSSLTALAQQQQRLLVSSLLPCDGPLQYVDPTADGLPGTSPSCSEEHNSCTRPDAAQQDRAVSMRVPHATAHERSEHASNDPGPSPPFLPAAEERLTGRSPDAADATSHLDHDGAADCATSSSSTATASTISMHITETCVLKDTLPAPPMQDQSSSEGGVDATAARYSSSPLVNAGSDATLTMTGMRSATPSSPLKAQSNSLQPKESAKVAIDAVSRGSAGQQPSASGGLTTMMTTATSTNTTTAARGLPRTMLPDTLSACTTMKGSETLSSQAGSLMLPLSDGTPPSCSMKAATAALSGPRREKRRPPSLFSSSPATTSLTVATRPVLITPAVSRQEDRSLTTSVTQTASSVSQTNQPLHGQVQRPPAPLPRTPGAPSPLSSTLVSSALPTHGDGGVEEDADGERLSTLVVRRDLHELAATRLPMNPASYAPVHVKLPAVLPTTSPPLRSGRPAHPIAAQQHRAACESQGGLTGSSGASTAAHHSAAGATTPAAIAPVSTPSSVTMFHYGSFQAGYASTAAAGGAVTPNATPLLSNSSLCGFANYCGAGSLGSGSAPAASLSTATSTACANRLQPPSAARLSVTGMGGGGGGAVAGVLSPLSLSGAAATARTVRRRAPPPLLFRLRSPVGPAPPSTAVSANDTSGEMTSPGSVAPPSSASRTATSAAAAAASAGACSSVLTTPPLNSRSMGMTMNSGSASDLASTMADRPARGSGCNPPATPARSGPFARAHGSVAQNLNTFSSSTRSGGLVRISHDRRTLVAGMFRVSRDGCLTVRNMLLLNPTRIDAGSATGGAAGPGCTCGSFMGSSTTGTGGGGSRSRPLQLLHPQRSATNYSPVSSNGGLVGRMQLLGPGGGNDLGGGGGAGGGAGGLGPMTPNTTGSDWYSPHAYHGGGGGSGNTRNDXXXXGGKRGGANTTANASFTLFSTSMDTPFSPITYSMDSQRLALPSPLGVHHDRAGAAAGPPPQLLGTVCENTATSHFLGASGSPHQQPQPHDGLLPGSHHVTETNASPTRNLGFGMVTGGAAAAAQQQVATPNSTTALGRPSGGSGGNICHAQLRRQASNGWLPGALGATNTASPPPFAAAGGAGGMLNAGAFTDTDTANSLLLPYADIPTYRGGIASATAGSRVDSPSGHTNPGGFRTTTTAATATTAAAPMMGGSGATQNTSFPPLPPNVVRLR-DLDILSTTCGEGASATVFVAIHKPTGRRLAVKRVDLSPLCLGCSSPFLRSGAVSSGRINQLQRIVVRELQVLHLTYRSPFMVKVYNAFFLAEVAALDIVMEFMHYGSLDHLADCLQQHARMVRGSQQERHRLLTGDDDQDDGDGGGHSGRCGSVHGGSPSVPPLLCDAPEAPQVTEGFLKDTSAAGVGRSGTGGDTERRPSITSTSPKLLDSQRTLAERAPPSAPRPCISRVVDTTGSSDVDSIACGSGGVPCHPLTGGYKHIYGSNDSLLLDSYSVKSDCGTDDSESDDGSGLVEEPLGVTERLVAVVGEQLLRGVRDMHSRGYIHQDIKPGNVLV----NEHGVVKLSDFGLSQRCDSTGLGIKNDMLTYVPPPSVAPAQSITPLQSPSLTVLPLTGARGRRAPFVWHAQRGSIGAGISGQLGSGMVGTTPPEMGSSAEGLVFSSTTNSLLAQRDGMDVLEAESTSSEEGPGEWDATRRGRSGLNPSSSSSDDAGDCCGTDKYMSPERQRGEPYGKPADIWAVGVTLAEFAVGEYPYDLKDVIDEFDRVSRMDKPVDVLQFNKHRAVPLGTVFADFCRLATLPTASQRPTAQELLEHPFFKQWHRPFNLKDYLAARVPVPSNRLKEDYLAKQRERPPEGQQPAGPPG |
2QR8 Chain:A ((19-286)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QFTDGYEVKE-DIGVGSYSVCKRCIHKATNMEFAVKIIDKSK------------------------RDPTEEIEILLRYGQHPNIITLKDVYDDG--KYVYVVTELMKGGELLDKIL---RQ------------------------------------K------------------------------------------------------------------------------------------------------------------------------------------------FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG-----------------------------------------------------------------------------------------------------------------------------------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSG--KFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHWDQ------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1179 -33054 -28.04 -125.68
3D Compatibility (PKB) : -28.04
2D Compatibility (Sec. Struct. Predict.) :
1D Compatibility (Hydrophobicity) :
QMean score : ?
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