Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRAKIDDENSSVAVTLLPSAQVEPLASSQPPTRTGAVGTMVNTDAIDARGNDAESSGGGSAPSSMATTTTINAVFYNPSAQLPTPPPLHRNSSSPAPMQHLQHEEPQRLRAVPYFPASCESDSNEEPLFQHPPPAKPRAPLRPAPQSGRLWGAVSATPSSAGFVSGGTAPYASLLHTSSAPAVADTETSSTTAGHGLVVGCETSNHCLPASIKAHPPASATSPASIHGGYSDSVSDSTATTTVGNHSSGGRGLRRPPLMTGPNGAAVPLASPMLSGPQGRWVRSSGDESSSGFATLAVPAAPANLGDTVLVAEPPTPTKQRRTIHTGMGNTVSLSCGGIGAAPRLSTSAAASTGTCASAAAATSAAAVAGGASPKPSLRIAAPFRGLGYNPAANSVSAPASRATTSSMSTAPPPPSFKCYRREGSRKRSADVLSQFSALDLDETPATPFAQTGTSRFTSINHNGNGHNAFPSQPSPSTAVYRGAGGGSNAISTVSPLTIDYATPVALSQQIGGSNTFSQVLLHPSQDVLDMSQAETECSNFLARRILKEYNEVRLLGSGSFGTVSLFKEISSGEYVAVKMSPPLRTPEMERRYRRERSVMGMVRGLPHVVQLSAAWEEGRVPRMYLQLEYCPGGSVASVANAKQSRNEPWPEAEVKVFLAHMSIALDALHRANIAHVDFKPDNVLVDKDGAYKLSDFGCSVLLDERGRPRPETRNGYGSLARGQRAGWVGGVACANPNGGPAVHTGAGVGAGGLGSSLDFNNWNEGNELSTMSIDEGDCRYLCADMLNEKQHFKAGDMFSLGMSLFELMSGQPLPRNGDQFLALRRRVPV--EVLRRRGYSADLVELVVALLRSDPPQRPTARQVLQYLRLSSEELQLLSSASAMKRWTESAESFLQLQEEERQQPPLGKDGVLAATVDALRCVSALMEASMWLFTTTQQDVHRLAAPANAGKGEDEEDERRRQQTQQPQPQPLLQLPRGQQLEDLPMSPIQCDEACTPTALNY
3BKB Chain:A ((113-370))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS-HPNIVRLIGVCTQKQ--PIYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA------------------------------------------------------------ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ--------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3BKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1307 -82463 -63.09 -322.12
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -63.09
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.445

(partial model without unconserved sides chains):
PDB file : Tito_3BKB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BKB-query.scw
PDB file : Tito_Scwrl_3BKB.pdb: