Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFNPNQRYTRWSI---RRLSVGVASVVVASGFFVLV--GQPSSVRADVVNPTPGQVLPEETSGTKEGDLSEKPGDTVLTQAKPEG-----VTGNTNSLPTPTERTEVSEETNSSSLDTLFEKDEEAQKNPELTDVLKETVDTADVDGTQASPAETTPEQVKGGVK----------ENTKDSIDVPAAYLEKAEGKGPFTAGVNQVIPY-ELFAGDGMLTRLLLKASDNAPWSDNGTAKNPALPPLEGLTKGKYFYEVDLNGNTVGKQGQALIDQLRANGTQTYKATVKVYGNKDGK-------ADLTNLVATKNVDININGLVAKETVEKAVADNVKDSIDVPAAYLEKAKGEGPFTAGVNHVIPYELFAGDGMLTRLLLKASDKAPWSD-NGDAKNPALSPLGENVKTKGQYFYQVALDGNVAGKEKQALIDQFRANGTQTYSATVNVYGNKDGKPDLDNIVATKKVTININGLISKETVQKAVADNVKDSIDVPAAYLEKAKGEGPFTAGVNHVIPYELFAGDGMLTRLLLKASDKAPWSDNGDAKNPALSPLGENVKTKGQYFYQVALDGNVAGKEKQALIDQFRANGTQTYSATVNVYGNKDGKPDLDNIVATKKVTININGLISKETVQKAVADNVKDSIDVPAAYL-EKAKGEGPFTAGVNHVI-----PYELFAGDGMLTRLLLKASDKAPWSDNGDAKNP--ALSPLGENVKTKGQYFYQVALDG-NVAGKEKQALIDQFRANGTQTYSATVNVYGNKDGKPDLDNIVATKKVTININGLISKETVQKAVADNVKDSIDVPAAYLEKAKGEGPFTAGVNHVIPYELFAGGGMLTRLLLKA---SDKAPWSDNGDAKNPALSPLGENVKTKG-QYFYQLALDGNVAGKEKQALIDQFRANGTQTYSATVNVYGNKDGKPDLDNIVATKKVTINI-NGLISKETVEKAVADNVKDSIDVPAAYLEKAKGEGPFTAGVNHVI---PYELFAGDGMLTRLLLKASDKAPWSDNGDAKN------PALSPLGENVKTKGQYFYQLALDGNVAGKE--------KQALIDQFRANGTQTYSATVNVYGNKDGKPDLDNIVATKKVTIKINVKETSDTANGSLSPSNSGSGVTPMNHNHATGTTDSMPADTMTSSTNTMAGENMAASANKMSDTMMSEDKAMLPNTGETQTSMASIGFLGLALAGLLGGLGLKNKKEEN
4XC8 Chain:A ((42-1113))GPANKVRFVTAASLFDGHDASINIMRRILQSQGCEVIHLGHNRSVQEVVTAALQEDVQGIAISSYQGG--HVEYFKYMIDLLREHGGEHIQVFGGGGGVIVPDEIRELQAY----GVARIYSPEDGQRMG--LAGMITDMAQRCDIDLTRYAP--TTLDTVVAGDRRALAQLITALENGKADPELVSALHAQAKAAAVPVLGITGTGGAGKSSLTDELIRRFRLDQDDALS-----------------------IAVISIDPSRRKSGGALLGDRIRMNAINHPNIFMRSLATREAGSEISQALPDVIAACKAARFDLVIVETSGIGQGDAAIVPHVD---------------------LSLYVMTPEFGAASQLEKIDMLDFADFVAINKFDRKGAQDAWRDVAKQVQRNREQWHSRAEDMPVYGTQASRFNDDGVTMLYQGLVGALGARGMSLKPGTLPNL-------------------------------------------EGRISTGQNVIVPPARSRYLAELADTVRAYHRRVVAQSKLARERQQLRAAHDMLQGAGH-----------ESAALETLASERDVSLGAVERKLLAMWPQMQQAYSGDEYVEIRTGLISTT--LSGTKIRKVVLPRFEDEGEILKWLMRENVPGSFPYTAGVFAFKREGEDPTRMFAGEGDAFRTNRRFKLVSEGMEAKRLSTAFDSVTLYGEDPHERPDIYGKVGNSGVSIA-----------------TLEDMKVLYDG----FDLTN--PSTSVSMTING-----PAPTILAMFMNTAIDQQIDRFRADNGRDPTADEEAKIRAWVLQNVRGTVQADILKEDQGQNTCIFSTEFSLK--VMGDIQEYFVHHQVRNFYSVSISGYHIAEAGANPISQLAFTLANGFTYVEAYLARGM---HIDDFAPN--LSFFFSNGMDPEYSVLGRVARRIW------AVTMRDKYGANDRSQKLKYHIQTSGRSLHAQEIDFNDIRTTLQALIAIYDNCNSLHTNAYDEAITTPTAESVRRALAIQLIINREWGVAKCENPNQGSFLIEELTDLVEEAVLQEFERIAERGGVLGAMETGYQRGKIQEESLYYEQLKHDGT--------LPIIGVNTFRNPNGDPRSSEDEKQSQLHRLTEFHGAHQADAEAMLARLRQAVID--NRNVFAVLMDAVRVCSLGQITHALFEVGGQYRRNM--


General information:
TITO was launched using:
RESULT:

Template: 4XC8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 5718 289993 50.72 290.57
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : 50.72
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.152

(partial model without unconserved sides chains):
PDB file : Tito_4XC8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XC8-query.scw
PDB file : Tito_Scwrl_4XC8.pdb: