Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKKLTDYVIDLVEILNKQQKQVFWGIFDIFSMVVSIIVSYILFYGLINPAPVDYIIYTSLAFLFYQLMIGFWGLNASISRYSKITDFMKIFFGVTASSVLSYSICYAFLPLFSIRFIILFILLSTFLILLPRITWQLIYSRRKKGSGDGEHRRTFLIGAGDGGALFMDSYQHPTSELELVGILDKDSKKKGQKLGGIPVLGSYDNLPELAKRHQIERVIVAIPSLDPSEYERILQMCNKLGVKCYKMPKVETVVQGLHQAGTGFQKIDITDLLGRQ------EIRLDESRLGAELTGKTILVTGAGGSIGSEICRQVSRFNPERIVLLGHGENSIYLVYHELIRKFQ--GIDYVPVIADIQDYDRLLQVFEQYKPAIVYHAAAHKHVPMMERNPK---EAFKNNIRGTYNVAKAVDEAKVSKMVMISTDKAVNPPNVMGATKRVAELIVTGFNQRSQSTYCAVRFGNVLGSRGSVIPVFERQIAEGGPVTVTDFRMTRYFMTIPEASRLVIHAGAYAKDGEVFILDMGKPVK---IYDLAKKMVLLSGHTES-------------------EIPIVEVG-IRPGEKLYEELLVSTELVDNQVMDKIFVGKVNVMPLES----INQKIREFRTLS---GDELKQAIIAFANQTTHIE
3PVZ Chain:A ((7-386))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILSLIGRDTELFHQDINANEKELQSVVSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYDYVLNLSALKHVRS-EKDPFTLMRMIDVNVFNTDKTIQQSIDAGAKKYFCVSTDKAANPVNMMGASKRIMEMFLMRKSE--EIAISTARFANVAFSDGSLLHGFNQRIQKNQPI-VAPNDIKRYFVTPQESGELCLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQLGYEPHLCESEDEARELAKTLPAQGKWPCLFTSS---------EFFTDKETLDMARFDNLGIIKNDSLYQQELLELFEQKIGQMKTDRQWTKEEIVQLFFIMIPDF----


General information:
TITO was launched using:
RESULT:

Template: 3PVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1737 36802 21.19 111.52
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 21.19
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_3PVZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PVZ-query.scw
PDB file : Tito_Scwrl_3PVZ.pdb: