Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------------------------MPIDTQLTTLF-------------------CLIDDFCTDIT---------------QNVEQYMLTYGQTKRL-RQSKIHASEVITLLLWFHLT-GSRNFKAFYLY-----WAKPFLCSYFTNLPSYSRFIELKAKYAMYFVALIESLKVHSA---GIAFIDSTKLAVCHNKRIHQHRVFADSASRGKTSVDWFYGFKIHLICDHIGRLVSYCITTGNVDDRK---------------VLPDLIEHSKLKGKLFGDRSYVGKNWKSRLAEVGVQLITRVKRNMKPQVLAP-----FDHAVLRKRGIIEAPFKLMKSQFDLEHSRHRSKMGL-LTTIFAALTLYALVLVNGYKSGIQQILKPIDLNSA
4USR Chain:A ((1-357))GPAMPPILDVIVIGGGQAALTTAYFLRRTSLSYLLLDEQPGPGGAWLHAWDSLRLFSPAAWSSIAGWPMPSPTEPGNPTRNDVIDYLRRYEDRYQFPIQRPVRVDTVTRLDDLWRVQAGDQQWLARAVISATGTWSKPFI-------PPYEG------------RELFQGAQIHSAHYRTPAPFAGKRVMVVGGGN-SGAQVLAELSSV--SETLWITQEPPAFLPDEVDGRVLFERATARWKAQQEGRSIDEPAGGFGDIVMVPPVREARERGVLVAERPF------ARFTETGVEWADGRRENLDAVIWCSGFRPALDHL--RELGVVEADGKVQVEDTRVVKQPNLWLVGYGDWTGMASATLIGVTRT--ARSTADQVVQALTATP-


General information:
TITO was launched using:
RESULT:

Template: 4USR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1167 -18382 -15.75 -68.59
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -15.75
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.186

(partial model without unconserved sides chains):
PDB file : Tito_4USR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4USR-query.scw
PDB file : Tito_Scwrl_4USR.pdb: