Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLLKVRQNVPQVQSIKTSLKKRAGQKIPHMLSNASDLFFRGSEIALSGKTPFDVIYKHEIISLRHYRIETEASAHKHRVPLVIVPPLAVNMLIYDLFPTRSLIRYFLDQGFEVYLIDWGVPTRNQAK---YNFGTYVKVFMPEMLKQVRIHSGQQQLSLHGWSLGGALSLCYTALFKDKDIKNLMILASPIDTHKAGYMGKLYGSLTKPAQWVRKHTPFRIRQHVPSEVFHIHGWQNTLGFKLTAPIGNLKTYWQLLKNLDNREFIVDHATSSSFIDNMLAYPGGVMRDIILRFWIDNELSTGVIKFGELTAYLKDIDCSVLAVGGDTDIIVTADAVKPLMDLISSQDKTFKTVPSGHMGVVSGSQAPTSVWPEMSNWLAMRSD
2XUA Chain:H ((6-264))--------------------------------------------------------YAAVNGTELHYRIDGE---RHGNAPWIVLSNSLGTDLSMW-----APQVAALS-KHFRVLRYDTRGHGHSEAPKGPYTIEQLTGDVL-GLMD----TLKIARANFCGLSMGGLTGVALAARHA-DRIERVALCNTAARIGSPEVW--VP-----------RA----VK----ARTEGMHAL-ADA---------VLPRWFTADYMEREPVVLAMI---RDVFVH---TDKEGYASNCEA-----------IDAADLRPEAPGIKVPALVISGTHDLAATPAQGRELAQAIA--GARYVELDASHISNIE---RADAFTKTVVDFLTE---


General information:
TITO was launched using:
RESULT:

Template: 2XUA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 1573 -78590 -49.96 -306.99
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain H : 0.63

3D Compatibility (PKB) : -49.96
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.363

(partial model without unconserved sides chains):
PDB file : Tito_2XUA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XUA-query.scw
PDB file : Tito_Scwrl_2XUA.pdb: