Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSTLNTRLIWIDLEMTGLDTDNDQIIEIATIITDDHLNVLAEGPVLAIHQPDRILNAMDEWNTRQHGQSGLIERVRRS-KLTARDAELQTLEFLKKWVNPKVSPMCGN-SICQDRRFLHRLMPELEQY-----F-----HYRNLDVSTVKELSKRWRP------------------EIMSGL--KKNASHLAMDDIRDSISELKYYREYFFIMNTDGKD
4JS4 Chain:A ((11-204))-----QSTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGEPEVFYCKPADDY--LPQPGAVL---ITGITPQEARAKGENEAAFAARIHSLFTV----PKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDV---MRACYALRPEGINWPENDDGLPSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQ---------


General information:
TITO was launched using:
RESULT:

Template: 4JS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 676 -30618 -45.29 -189.00
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -45.29
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.357

(partial model without unconserved sides chains):
PDB file : Tito_4JS4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JS4-query.scw
PDB file : Tito_Scwrl_4JS4.pdb: