Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQLTVDEAAKEILAY--QQITFLTGAGVSTPSGVPDYRSL-SGIYHGMEQ-----PEYLLSHQAMVNEPDKFYQFVKKIYHPEAKPNIIH--LEIAHLAKEKNVWVVSQNIDGLHAKAKSP--QLVNFHGSLYQCHCRKCQQTV---DWKEYLHSD---KHQACGGQIRPDIVLYGEGFQDGVMEQAAYAVSQAELIVIVGTSFQVHPFCDLVQFRQPSAKILVINQTPVYLAEPYTFIQEDGAVVFKKIQELGADYD
4BN4 Chain:A ((7-230))--KLSLQDVAELIRARACQRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELPFFFHNPKPFFTLAKELYPGNYKPNVTHYFLRLLH-DKGLLLRLYTQNIDGLERVSGIPASKLVEAHGTFASATCTVCQRPFPGEDIRADVMADRVPRCPVCTGVVKPDIVFFGEPLPQRFLLHVV-DFPMADLLLILGTSLEVEPFASLTEAVRSSVPRLLINR-------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4BN4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 945 -6826 -7.22 -33.13
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : -7.22
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_4BN4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BN4-query.scw
PDB file : Tito_Scwrl_4BN4.pdb: