Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMYLQDIDQQNMEGRKMKDMDIKAVFIGDKAENGPVYKMLLNKMVDEHLGWRENYIPSDMPAISEGDKLTPDYLATRDHMIEVLDEVSQRLRAGSIPWHSAGRYWGQMNAETLMPALLAYNYAMLWNPNNVALESSMATSQMEAEVGQDFASLFNMTDG---------WGHIAADGSIANLEGLWYARCIKSIPLAVKEVLPEKVKKMSEWELLNLSVEEILEMTESFTDEEMDEVKAASSRSGKN---IQRLGKWLVPQTKHYSWMKALDICGVGLDQMVAIPVQEDYRMDINALEKTIRELAGQKIPILGVVAVVGTTEEGQVDSVDKIVQLRERLKDEGIYFYLHVDAAYGGYARSLFLNEAGEFVPYASLAEFFEEHHVFHHCVTIDKEVYEGFRAISEADSVTIDPHKMGYVPYAAGGIVIKHKN-MRNIISYFAPYVFEKSV-KAPDMLGAYILEGSKAGATAAAVWTAHRVLPLNVTGYGQLIGASIEAAQRFREFLDHL-TFTVKGKTIEVYPLNHPDFNMVNWVFKEQGCTDLNAINELNEKMFDRSSYMDGDVYGERFITSHTTFTQEDYGDSPIRFVERMGLTKEEWKKEQKITLLRAAIMTPYLNDDRIFNFYTKKIAKAMEKKLNEIIQ
1JS3 Chain:A ((48-474))-------------------------------------------------------------------------QEPDTFEDILQDVEKIIMPGVTHWH-SPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAA--------------S-----------------------------PGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVK---LKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHE-----EDIWLHVDAAYAGSAFIC-------------------------------PEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFK-----------SGLITDYRHWQLPLGRR-FRSLKMWFVFRMYGV--KGLQAYIRKHVQLSHEFEAFVLQDPRFE-------VC--AEVTLGLVCFRLKGSD--------GLNEALLERINSA------RKIHLVPCRLR--------------------------GQFVLRFAICSRKVESGHV-----RLAWEHIRGLAAEL--


General information:
TITO was launched using:
RESULT:

Template: 1JS3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2221 -50522 -22.75 -126.31
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -22.75
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_1JS3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JS3-query.scw
PDB file : Tito_Scwrl_1JS3.pdb: