Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKVAPIL-KPIAVLTISTIVATTTGIVNSSSYRAPSSSSSTVEETTPTTSVSTSEPTTTESLNETTTTSTWDDTTTSSSYDETYTTDSSSETSNTVPDGTPSDSTNPSTSPDTSASSETIPSSTTVDDNTQNDDAARTAQQNQDSGNT-QTYNQQAGDSQ
1U7K Chain:A ((1-131))-----PLRMG-----------------GNGQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLTTHQPTWDDCQQLLGTLLTGEEKQRVLLEARKAVRGNDGRPTQLPNEVDAA--FPLERPDWDYTTQRGRNHLVLYRQLLLAGMQNAGR------


General information:
TITO was launched using:
RESULT:

Template: 1U7K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 455 36933 81.17 286.30
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 81.17
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.61
QMean score : -0.013

(partial model without unconserved sides chains):
PDB file : Tito_1U7K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1U7K-query.scw
PDB file : Tito_Scwrl_1U7K.pdb: