Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITMDDIIREGNPTLREVAKEVSLPLSEEDISLGKEMLEFLKNSQDPIKAEELHLRGGVGLAAPQLDISKRIIAVHVPSPDPEADGPSL-STVMYNPKILSHSVQDACLGEGEGCLSVDREVPGYVVRHAKITVSYYDMNGEKHKIRLKNYESIVVQHEIDHINGVMFYDHINDQNPFALKEGVLVIE
1VEV Chain:B ((5-167))------ILRMGDPILRKISE----PVTEDEIQT-KEFKKLIRDMFDTMRHAE-----GVGLAAPQIGILKQIVVVGSEDNERYPGTPDVPERIILNP-VITPLTKDTS-GFWEGCLSVP-GMRGYVERPNQIRMQWMDEKGNQFDETIDGYKAIVYQHECDHLQGILYVDRLKDTKLFGFNE------


General information:
TITO was launched using:
RESULT:

Template: 1VEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 803 -36194 -45.07 -223.42
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -45.07
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.401

(partial model without unconserved sides chains):
PDB file : Tito_1VEV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VEV-query.scw
PDB file : Tito_Scwrl_1VEV.pdb: