Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKIIVTTCLLATGFLLTACGESQSSNESQQTTIQFMHSSVEQERLSVINELVADFEKENPDIKIKQVPVEESAFNTKIVTLARSGKLPEVMEVSQD-FAKVMDKDELIDQTAVQNVIEEAGEDNYYDGAKNLVRSEDGKSYIAAPISGWVQGIWYDKEKLSEAGFSEPE---NWDDILKIAQHFTDKENKQYGIAMPTAEGTMSEQAFSQFALSNGANVLDDE-GEVTIDTEKMREALSFYQNLSQY-T-MPGS--NDVTEIKDAFMNGTAPMAIYSTYILPSVYEAGNSENIGFA-IPTQKDQAVYGTVSGLTISSGLDEKQKEAAEAFTAFLSQPKNMEKWVLMSPGGAQPVNKQVVELDGYKENEVIKSFGELPSEIASAFDEVQVFGLVGEKNFTKMGDITSSGVIGKAVNQVTVGNEDVDQALADAQKNTK
5F7V Chain:A ((11-393))-----------------------------DKTEITYYQFSAP---GKALDEMVKEFEKQNPDIKVNVQTIAFNDYFTKLQTQIAGGDAPDAFELNYETFMQYAEKGVLADLTSYIEKDKDFDPSTLNKQAYDAF-KYDGKQY-GMVESFSNVVTIYNKDLFDKAGVEYPTADWTWKDEEAAAKKLTDAKNKVWGTSQPVT-----MNEFYKVAAQNGGSIFNEDLTETTINSPENVEALTHLTNEVTDSKVAPSPADLSGQLPEDLFMNGQIAMLHTGIWLFDMFQDA--PFKWDVQVEAGNTQKATHFFANGIGVSKD--SDKKEAAFKFASFMSANEEAAKIRID-NNWELPATENKEILQPYLDATP-PDNRE---AVFESLQYMVL--PPVVKDWNK---I--SDYTNSEFEKVLNGDSTPEKALKNSEDNI-


General information:
TITO was launched using:
RESULT:

Template: 5F7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2030 75428 37.16 203.31
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : 37.16
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_5F7V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5F7V-query.scw
PDB file : Tito_Scwrl_5F7V.pdb: