Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MFNLLTAEKIKVWKSRKMWVS----------LGLMVVLPLFYSWNEWYMHTKY--GNELNQATDTVINGATGILMVEKMAAWILLAFA--AFACFYIGEEFQNGTIRNT-LSLGRNRMTYYVSKLLVTLLI-TTLGVVLITGLAMIA-----YTLAFGFGEV----------EGIKNYGNYVL-----KVF----PVLLLL----ILATLSVPVALTFITRSTSVSLLLSFLYIMGTAFVPGVFAKIKGLEFLTEWFTETWLMYTDFAQQATYSQAPKMILVSLVTIVVSSALGMFIFQKSDIK 1DMU Chain:A ((1-299)) MYNLHREKIFMSYNQNKQYLEDNPEIQEKIELYGLNLLNEVISDNEEEIRADYNEANFLHPFWMNYPPLDRGKMPKGDQIPWIEVGEKAVGSKLTRLVSQREDITVREIGLPTGPDERYLLTSPTIYSLTNGFTDSIMMFVDIKSVGPRDSDYDLVLSPNQVSGNGDWAQLEGGIQNNQQTIQGPRSSQIFLPTIPPLYILSDGTIAPVVHLFIKPIYAMRSLTKGDTGQSLYKIKLASVPNGLGLFCNPGYAFD--SAYKFLFRPGKDDRTKSLLQKRVRVDLRVL---DKIGPRVMTIDMDK

General information: TITO was launched using: RESULT: Template: 1DMU.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1188 -46389 -39.05 -181.92 target 2D structure prediction score : 0.35 Monomeric hydrophicity matching model chain A : 0.66 3D Compatibility (PKB) : -39.05 2D Compatibility (Sec. Struct. Predict.) : 0.35 1D Compatibility (Hydrophobicity) : 0.66 QMean score : 0.140

(partial model without unconserved sides chains): PDB file : Tito_1DMU.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1DMU-query.scw PDB file : Tito_Scwrl_1DMU.pdb: