Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSRYQCSLCQLETLENDLNFCVCCRAAVCAKCTLACYPNRKSVGLCVRCTPPDYGFACGRCRRHISYGDIEFFCDMCAVPICFTCVASGTSFECGQLKCSLCCECPMSQAPRNLVVRHEVDDAMLRQLPIPLVSSATPLAAPPPQARAAAAAVAATKSTKYRKLFGREKLGEGAQGVVYKCHTEENEVVVVKEMVFNDTDVTAFEAQARQVERMRQLNHPHLIRYLDVSVQKDPLRICVVMPFYSEGDLKKFIERQRKPVTEVKLCSIVLQIAGALNYLHRQEPPLVHRDIKPENILLLNHEEQVLLMDLDLCRTVDVTASVIKRRELSPTYEYRAPELEK-SHGDTKADVFSLGVVMFVLATLPDFPCVRTDSGEMLVFSASKWSPSSLKRAIQREIRRVQRYTYSEEFIRLVVAMLVHQPAARPTSGAVIYRLQKIMEQRLMEGKE
5P9J Chain:A ((21-277))------------------------------------------------------------------------------------------------------------------------------------------------------------------DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ--RPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ--FLHRDLAARNCLVND-QGVVKVSDFGLSRYVLDDEY-T---GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE-------------TAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE-------


General information:
TITO was launched using:
RESULT:

Template: 5P9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1274 -165384 -129.81 -653.69
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -129.81
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.436

(partial model without unconserved sides chains):
PDB file : Tito_5P9J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5P9J-query.scw
PDB file : Tito_Scwrl_5P9J.pdb: