Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISKRLELVASFVSQGAILLDVGSDHAYLPIELVERG-QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-AFEETDQVSVITIAGMGGRLIARILEEGLGKLA-NVERLILQ-PN-NREDDLRIWLQDHGFQIVAERILEEAGKFYEILVVEAGQMKLSASDVRFGPFLSKEVSPVFVQKWQKEAEKLEFALGQIPEKNLEERQVLVDKIQAIKEVLHVSK
5CCX Chain:A ((102-235))-------------RPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREEFQEHRVGRWVTVRTQDVCRSGFGVSHVADAVFLD-IPS--PWEAVGHAWDALKVEGGRFCSFSPCIEQVQRTCQALAARGFSELS--------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5CCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 597 -11927 -19.98 -96.97
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -19.98
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_5CCX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CCX-query.scw
PDB file : Tito_Scwrl_5CCX.pdb: