Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVKNSPAELSSALVNQRNDVPLIRYSGRFAPSPTGPLHFGSLITAVASYCDARAHQGRWLVRVEDTDIPRIYPGSEDHILASLEAFQFDPDAEI--------IFQKDRLDIYESVLDQLKKEGLVYACQCTRKMLGSNAIYAGTCRDLQLD--------FQHQAIRVKVQD-QPICFDDRLQGLHCSNLEHDLGDFVLKRRDGIINYQLAVVADDYLQGITHVVRGADLLDNTERQIWLGQLLGYPKLSYMHLPLAMNDQGQKLSKQNLAHALDLTKA----PELLQQAIQALGQPQVDL-ARPEVMLKQAVTQWNVDLIPHGQQLCGTYL
5TGT Chain:A ((10-322))-----------------------TTVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDQLRSTRESEQQIYDALRWLGIEWDEGPDVGGPHGPYRQSERGHIYKKYSDELVEKGHAFTCF----------------MHLPKDEVQRRLAAGESHVTRMKVPTEGVCVVPDMLRGDVEIPW-DRMDMQVLMKADGLPTYFLANVVDDHLMGITHVLRGEEWLPSAPKLIKLYEYFGWEQPQLCYMPLLRNPDKSKLSKRKNPTSITFYERMGYLPQALLNYLGRMGWS---EKFTLAEM----IEHFDLSRVSLGGPIFD---


General information:
TITO was launched using:
RESULT:

Template: 5TGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1197 -7607 -6.36 -29.26
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -6.36
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.578

(partial model without unconserved sides chains):
PDB file : Tito_5TGT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TGT-query.scw
PDB file : Tito_Scwrl_5TGT.pdb: