Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRAISHIDTFQGLILALQNYWAEQGCVVLQPYDMEMGAGTFHTATFLRALGPETWNAAYVQPSRRPKDGRYGENPNRLQHYYQFQVVL--KPNP---DNIQQLYLDSLKAIGIDTLTHDIRFVEDNWESPTLGAWGLGWEVWLNGMEVTQFTYFQQ-----VGGVECYPVTGEITYGLERLAMYLQGVDSVYDLVWTKGQFGTVTYGDVFHQNEVEQSTYNFEYAPVDKLFELFDFYESEANRLMEAKLPLPAYEQVVKASHTFNLLDARGAISVTERQRYILRVRTLARAIAQSYVQARAELGFPMAEPHLRDEVLAQLKAQAESEAAKAEKN
3DSQ Chain:B ((146-274))---------------------------------------------------WDKPIRIFEIGTCYRKESQ----GAQHLNEFTMLNLTELGTPLEERHQRLEDMARWVLEAAGIR----EFELVTESSVV------GDTVDVMKGDLELA-SGAMGPHFLDEKWEIF-DPWVG-LGFGLERLLMIREGTQHVQSMA-------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3DSQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 504 -18599 -36.90 -157.61
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : -36.90
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_3DSQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DSQ-query.scw
PDB file : Tito_Scwrl_3DSQ.pdb: