Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTKLAILILSLAFFGSAHADVKTLEQNLKTNYPDLPVKGVYQS--PVAGIYEVYTS-GRIVYTNQDAKYFFVGNLVDIKQQKNMTEERIAE-----LGKIDVKSLPLNQAI-KYVKGKGERTLYIFSDPDCPYCQRLEQNMVGV---DNVTVYVFLYPLTSLHPNAEKVSNQIWCSKNPSEAWTNYMLNRK---LP-AA-GKS-CTSPVQKNIALGQKLNIDGTPTLFLQDG----QKISGVPGDAKQIEELLQSVK
1V58 Chain:B ((4-230))----------------------PAPVKAIEK--QGITIIKTFDAPGGMKGYLGKYQDMGVTIYLTPDGKHAISGYMYNEK-GENLSNTLIEKEIYAPAGREMWQRMEQSHWLLDGK-KDAPVIVYVFADPFCPYCKQFWQQARPWVDSGKVQLRTLLVGV--IKPESPATAAAILASKDPAKTWQQYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPD-QKTLNIIMGN--


General information:
TITO was launched using:
RESULT:

Template: 1V58.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 875 28830 32.95 140.63
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : 32.95
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_1V58.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V58-query.scw
PDB file : Tito_Scwrl_1V58.pdb: