Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQPFVLYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWKVRYIRNITDIDDKIIKRANENGETIQQLTMRFIDAMNEDAANLGCLAPDEAPKATE--YIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAG----ASER-V----------DVE--------VEKKHPFDFVLWKH--------AKEN----EPSW-ASPWGNGRPGWHIECSAMS------TCC---LG-----------NHFDIHGGGSDLMFPHHENEIAQSEASTGEQYVNYWIHVGFINVDGEKMSKSLGNFFTIRDVMEKFHPEVIRYFIVSS-HYRSPVNFSDVALKEAK--TSLTRFYHSFKAYQQVYGQ----------------TTTETLDQSFVERFNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQAD--------QATVLYSTLRHLTNILGLVQHNVDDFLKSDIGQEALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTRQGTVWRRAD
5K0S Chain:C ((25-514))----------------------EKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGTDEHGIKMLQSARKEGITPRDLADRNTSAFRRMAEVLNSS-NDDYIRTSEERHYKASQAIWQAMVANGDIYKGG-YAGWYSVRDE-AY--YGEEETEVRADGVRYGPQGTPVEWVEEESYFFRLSAYQDKLLDLYENNP-GFIMPAERRNEIVSFVKSGLKDLSISRTTFDWGIPVPGD--EKHVMYVWVDALTNYITALGYPDTTDERWAYWPANAHIIGKDISRFHAVYWPAFLMSA-QLPLPKRVFAHGFLFNR-----------IDPFELVERYGLDQLRYFLMREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALETARKAMD-DQALHLALGAIFAVVAEANRYFAGQEPWALRKTDPARMGTVLYVTAEVLRRVGIMVQPF---------------IPQSAEKLLDILAVPADKRQF--ADVLASPLA-------------------


General information:
TITO was launched using:
RESULT:

Template: 5K0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1836 -39028 -21.26 -99.06
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.65

3D Compatibility (PKB) : -21.26
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.441

(partial model without unconserved sides chains):
PDB file : Tito_5K0S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5K0S-query.scw
PDB file : Tito_Scwrl_5K0S.pdb: