Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMLIRKAKKDDTDTIVAIIAPYVDQVIANDEGRSRFKSEAIQTIFD--REDIHYFVGEIDQQIVGIVAYME----------PSHLMHFFIKKTHLKLGLGRQLWDFIEEKIKNENIDIEKITVNS-SFYAQDIYEKFGFIVSGDAAEK-WGIRFIPMTKYYALASEK
3F5B Chain:A ((14-176))-RFCFKQMNKSQHELVLGWIHQPHINEWLHGDGL-SNTIKDLHEFLNDGKPWATHWIAYDNEIPFAYLITSEIEKSEEYPDGAVTLDLFICRLDYIGKGLSVQMIHEFILSQF-SDTKIVLINPEISNERAVHVYKKAGFEIIGEFIASWHPVPHYKMKLCIEDLK--


General information:
TITO was launched using:
RESULT:

Template: 3F5B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 579 -36214 -62.55 -243.05
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -62.55
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.382

(partial model without unconserved sides chains):
PDB file : Tito_3F5B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3F5B-query.scw
PDB file : Tito_Scwrl_3F5B.pdb: