Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMK--IVILNKPYDVLSQFRKDEAHMTVSDFVDDPTLRIAGRLDMDSEGLVFLT--DHGGLNQFITNPANKKYKTYLV--------QVDGDVTEEA-----LEQLRKGVELNDGMTL------------PAKAIKVSEPEWLWDRDPPVRYRASI-----PTSWIEISICEGRNRQVRRMTSAVGFP------TLRLIRTKIGTIDLVQ-LGLQPGETKEIEPLLYPDFKDVPAEQPYRSRSYVRKPGGTGGKPMVRKNKDGSAKKSGTKRIWQMDESE--------KPRRKTNGTTRPNTKAPRGRSRNSR
1R3E Chain:A ((1-309))MKHGILVAYKP----KGPTSHDVVDEVRKKLKTRKVGHGGTLDPFACGVLIIGVNQGTRILEFYKDL-KKVYWVKMRLGLITETFDITGEVVEERECNVTEEEIREAIFSFVGEYDQVPPAYSAKKYKGERLYKLAREGKIINLPPKRVKIFKIWDVNIEGRDVSFRVEVSPGTYIRSLCMDIGYKLGCGATAVELVRESVGPHTIEESLNVFEAAPEEIENRIIP-LEKCLEWLPRVVVHQESTKMILNGSQIHLEMLKEWDGFKKGEVVRVFNEEGRLLALAEAERNSSFLETLRKERVLTLRKVFNTR


General information:
TITO was launched using:
RESULT:

Template: 1R3E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1281 57569 44.94 224.88
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : 44.94
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.256

(partial model without unconserved sides chains):
PDB file : Tito_1R3E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1R3E-query.scw
PDB file : Tito_Scwrl_1R3E.pdb: