Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMWNPNSIIFCFYFIFSILALWGIIEAWVHQSRTETIHPFKAFVHLLAFYLSYLLIPLWFFNLYAGWIGYYSIHETIFIFLLSGILIYARFIEPHMVRVDVHQYRLNPDRHFVKPVKVALIADLHIGLFSGHERQLKIIVKKLNEQQPDLVVVAGDWTYEPED--KLVQELSVLKDIKAPVYSVPGNHDEQYPGPPIQQLLKDALYY----NDVMDIEGKIVEFD-EFRLIGIGDLWAG-----KT----DMRSMPD-----L--PQDKPWLILSHNPDTVDMV-----------PKLPNRPLMLS---GHTHGGQVELPLVTNYIMKKVSILGHKRGFYSHEHADVFVTVGTGMVGIPLRFRVPPTIDIIELA
1UF3 Chain:G ((3-195))---------------------------------------------------------------------------------------------------------------RTVRYILATSNPMGDL-----EALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAHLPTAYVPGPQDAPIWEY-----LREAANVELVHPEMRNVHETFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELKDYPKIFLFHTMPYHKGLNEQGSHEVAHLIKTHNPLLVLVAGKGQKHEM-----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1UF3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 775 -16936 -21.85 -108.56
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain G : 0.53

3D Compatibility (PKB) : -21.85
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.500

(partial model without unconserved sides chains):
PDB file : Tito_1UF3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UF3-query.scw
PDB file : Tito_Scwrl_1UF3.pdb: