Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTRTPSSLAPLPLSSFKQLSMNAPVQERSGTSSSNAPPAHKKQRHEGGCSGKVLDDRDADSVRVWGVLVAQNLPSRENGLLAHAPRCRCPVEGADAPGKESVTKLIASSSLREPEEDWLWRHVPPALRQFYFPVCSHSGSTYPCAPASAECSEKCWAASLQQEGDKSHPSPSPRLLLPLCGTRSNNGAVRLGRLASNGIVFATNPCVSNVHCTIAYQPGSDPRRGDAAAAATVAAEDKEAQRAAYEAAGAVAKVVAPLHRSPQPATDAPAAPHPRGDATGRNAARIMLSDYSTNGCIVNGQKVGKGRSARLRDGDVVELINAGPRRTTDYNLSFLFLTAEAFVRWVAEQPHQASTTQGADEDIALAEKEQQQRQALQTAARRRALLCRAQWNVEAQVRRMYGHSVDEYYSLDRAHPLGQGTFGTVYRAALRAEASASSQSPSLLDAGGGVAAGVPSSWEYVFSGDGVGEWTANPAEAAELREAYIRGKERRAPASVLHVSASAASTTAAEADAITTDDAAPQVFAVKIIRKQRMLFEALQQQQQQQHVEEGEGGTDRAPVSCIRNAATVATPGTAGAVPGTISAADAAVIEQLLLMETQPDDLAAQRRKEWTAGVLASLQLADLTPAALTPSSSLSAFRKSQHKPRDDDDSSDDGDAQPLSQQDREQRRRELIRCLPEALRRTYERELQHRRRQQREINILLAVRHRNVTALYEVFDQPDHLALVMEQATGGEVWDLLQIYKRRERGGKTGARKSERGANNHRNAGAQRLGDGKSNSTTAAATAATCDDDDDVELVSVGGPLPEFIVKIIIVQVIEAVLYLHTMGIIHRDLKLENLMLQRPCDRYALNALQLQTLVHQLRAYSHSHHASDASTSAATTCEEDSEAVEFTNPLSVLYTVHVPRHMWPVVKIMDFGLSHVLDHLQTHPFDSAGALHGFAGTLSQMSQGVEGRSAAAASAATEAVPERVKLIYSRNDATTSCGTPIYAAPEVTNPALRPDKMGYGAAVDMYSVGVIAYALLTGRAPFPSAKNPRRPGGPPVVNYDAPLRFQRHRRRPAVPKGATGPPASAGPLPSSRPSSSAARPPSEVACLPPLSVVESVRVVLPKERAETSAAFSAASEQTRQWHRRAEAVAASVRCAEQKRALAEGSDGGSSATPADTLFATTVEQLCASLTAYADMCASGGLEVDLDRLVYVSADAAATGVQANASVGRVMAPDGHVADVLLPPISALGTSFLRGLLEKYPSRRLTAYEALRHPWLRECV
1KOB Chain:A ((58-253))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELGSGAFGVVHRCVEKATGRVFVAKFINTPY-------PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAED---------------------------------------------------------YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKK--------------------------------------------------------------ASSVKIIDFGLATKLNPDE--------------------------------------------------IVKVTTATAEFAAPEIVDR------EPVGFYTDMWAIGVLGYVLLSGLSPFAGE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1KOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 791 -102568 -129.67 -523.31
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -129.67
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.290

(partial model without unconserved sides chains):
PDB file : Tito_1KOB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KOB-query.scw
PDB file : Tito_Scwrl_1KOB.pdb: