Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRWILFIGALIGSSICGQEKFFGDQVLRINVRNGDEISKLSQLVNSNNLKLNFWKSPSSFNRPVDVLVPSVSLQAFKSFLRSQGLEYAVTIEDLQALLDNEDDEMQHNEGQERSSNNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGK--GVRRPAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQ--NRLWRKTRSRNPGSSCIGADPNRNWNASFAGKG-ASDNPCSEVYHGPHANSEVEVKSVVDFIQKH-----GNFKGFIDLHSYSQLLMYPYGYSVK-KAPDA-EELDKVARLAAKALASVSGTEYQVGPTCTTVYPASGSSIDWAYD-NGIKFAFTFELRDTG-TYGFLLPANQIIPTAEETWLGLKTIMEHVRDNLY
4IHM Chain:A ((5-315))----------------------------------------------------------------------------------------------------------------------YDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYSYTYTDVPSDMTQDDFNVFKTMANTMAQTNG--YTPQQGS-DLYIADGGMD-WAYGQHKI-FAFTFEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKADCP--


General information:
TITO was launched using:
RESULT:

Template: 4IHM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1697 14893 8.78 50.31
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : 8.78
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.601

(partial model without unconserved sides chains):
PDB file : Tito_4IHM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4IHM-query.scw
PDB file : Tito_Scwrl_4IHM.pdb: