Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MAVYRLCVTTGPYLRAGTLDNISVTLVGTCGE-SPKQRLDRM-GRDFAPGSVQKYKVRCTAELGELLLLRVHKERYAFFRKDSWYCSRICVTEPD-----GSVSHFPCYQWIEGYCTVELRPGTARTICQDSLPL-LLDHRTRELRARQECYRWKIY---APGFPCMVDVNSFQEMESDKKFALTKTTTCVDQGDSSGNRYLPGFPMKIDIPSLMYMEPNVRYSATKTISLLFNAIPASLGMKLRGLLDRKGSWKKLDDMQNIFWCHK-TFTTKYVTEHWCEDHFFGYQYLNGVNPVMLHCISSLPSKLPVTNDMVAPLLGQDTCLQTELERGNIFLADYWILAEAPTHCLNGRQQYVAAPLCLLWLSPQGALVPLAIQLSQTPGPDSPIFLPT-DSEWDWLLAKTWVRNSEFLVHENNTHFLCTHLLCEAFAMATLRQLPLCHPIYKLLLPHTRYTLQVNTIARATLLNPEGLVDQVTSIGRQGLIYLMSTGLAHFTYTNFCLPDSLRARGVLAIPNYHYRDDGLKIWAAIESFVSEIVGYYYPSDASVQQDSELQAWTGEIFAQAFLGR---ESSGFPSRLCTPGEMVKFLTAIIFNCSAQHAAVNSGQHDFGAWMPNAPSSMRQPPPQTKGTTTLKTYLDTLPEVNISCNNLLLFWLVSQEPKDQRPLGTYPDEHFTEEAPRRSIAAFQSRLAQISRDIQERNQGLALPYTYLDPPLIENSVSI 3VF1 Chain:A ((20-698)) -MKYKITVETGDLRGAGTDASVSIKLTGKDGAETSAFSLDKYFHNDFESGGTDTYDQSG-VDVGEIAMITLKENGFG--LKSDWYIAKVIIEKIDEATGFSNKYIFPCYRWVIKQ--LVVYEGKAILPNSKDNVKTIAEQRTKEVSENKKLYKWGTDPRYVQDLPGFVDAE-----------------------------------------EPKSLPKDVQFTDEATSSLFRVGLADFANLGLSHLFGIWDDWDCLEDFRQLITPAIKSGLPH-AAEYWRDDVWFGSQFLNGSNPEVIRRCDKLPENFPVKNEMVEKLLDRGYTLEKAMKEGLIFITDYKILEGIPTMDTPEDKRYITTPLGLFYLKNNDDIIPIAIQLYQQPGENNSIWTPLKDTEWDWIMAKLWLRCADTQYHQMITHLLRCHLMMEPTAVSSWRNLPSVHPVWKLLYPHTKGIMAINTLGRNDLIPTGGAADKVLSIGGGGQVTLMQKHYRSVTFDSYDLVKDLRQRGVDGLRKFYYKDDALLLWNVIHQFVQDIIQIYYNDDDSVKKDNEIQDWIRDLHENGYPAGSDGTDKKVPKSFENREELVHFLTVVVFTCSCQHAAVNFSQMATYGFHPNSPTLMRQPPPTEKGKSNHKVIMASLANKHQAVTMVSVVNALTTIYPTEKFLGDYADNLFGDAAAHAAMAKFKSNLANITKQITERNQGMVSPYTWLIPGHVPNSIAI

General information: TITO was launched using: RESULT: Template: 3VF1.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3569 41876 11.73 63.16 target 2D structure prediction score : 0.55 Monomeric hydrophicity matching model chain A : 0.76 3D Compatibility (PKB) : 11.73 2D Compatibility (Sec. Struct. Predict.) : 0.55 1D Compatibility (Hydrophobicity) : 0.76 QMean score : 0.392

(partial model without unconserved sides chains): PDB file : Tito_3VF1.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3VF1-query.scw PDB file : Tito_Scwrl_3VF1.pdb: