Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLDEESSE-FICRNTFDHPYPTTKLMWIPDTKGVYPDLLAT-SGDYLRVWRVGETETRLECLLNNNKNSDFCAPLTSFDWNEVDPYLLGTSSIDTTCTIWGLETGQV---LGRVNLV------SGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMAMDGMEVVILDVRVPC--TPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPRA---------IEDPILAY----------------TAEGEINNVQWASTQPDWIA-ICYNNCLEILRV
5CXB Chain:A ((152-506))-----------------ANSSAAVQ--PGQE-RVLSASY----DGLLRIWNASGSVIATSPSGSHGGHTASIKAAKF-LTSDR----LASAGMDRTVRVWKYTESDHFTGELKPTLELYGHTGSVDWLDVDG-HSKHILTASADGAIGFWSASKASAPEPDASLLPGAHVSTAQRGPLGLWSIHTAPATAAIFDPRD--RTVAYSASQDHTVRTLDLTTGQVVSTLTLTHPLLSLSALTRAGTTSPLLAAGTSAR-HITMVDPRASSATT-VMTLRGHANKVVSLSPSPENEYSLVSGSHDGTCRVWDLRSVRPATKEEGSLGGVSEPVYVIERESWASKGKKKRPVAGDGCKVFSVVW---DKLGIFSGGEDKKVQVNRG


General information:
TITO was launched using:
RESULT:

Template: 5CXB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1727 -5171 -2.99 -16.95
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -2.99
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.265

(partial model without unconserved sides chains):
PDB file : Tito_5CXB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5CXB-query.scw
PDB file : Tito_Scwrl_5CXB.pdb: