Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MILRHLGISPTNDLVAKKIFSNPEITCQFIRDML-DLPAKNVTILE---GSDIHVLLSMPYSVQDFYTSIDVLAELDNGTQVIIEIQVH--HQNFFINHLWAYLCSQVNQNLEKIHQREGDTH---------
2M89 Chain:A ((1-134))MVNINHRIGIKASPEKIYQALTTDDGLKKWWTNDISGAGVVGSTIKFRFNGGGPDFKVTKLIPNKTVCWQHAGNMPESWMGTEISFQLETVENQTFVRFTHSNWHETTDFMAHCNTKWAVFLLSLKDALEIGKG


General information:
TITO was launched using:
RESULT:

Template: 2M89.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 457 10157 22.22 86.81
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 22.22
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.211

(partial model without unconserved sides chains):
PDB file : Tito_2M89.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2M89-query.scw
PDB file : Tito_Scwrl_2M89.pdb: