Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFPSEQEQIEKFEKDHVAQHYFEVLRTLISKKSVFAQQ---VGLKEVANYLGEIFKRVGAEVEIDES-----------YTAPFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDLDKYLEKHADKL-RGADLLVWEQGTKNALEQLEISGGNKGIVTFDAK--VKSADVDIHSSYGG-VVESAPWYLLQALQSLRAADGRILVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFEPALNIEGIQSGYQGQGVKTILPAEASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-D--KVELYYTL--GEMSYRSDMSAPAILNVIELAKKFYPQGVSVLPTTAGTGPMHT-VFD-ALEVPMVAFGLGNANSRDHGGDENVRIADYYTHIELVEELIRSYE
2ZOG Chain:A ((8-474))------LKAVFQYID-ENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGKLGSD-PQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSD--KDLHSGVYGGSVHEAMTDLISLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDM-EEFAKDVGAETLLHS-CKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYMGHGGKPWVSDFNHPHYQAGRRALKTVFGV-EPDLTREGGSIPV-TLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRLNYIEGTKMLAAYLYEV-


General information:
TITO was launched using:
RESULT:

Template: 2ZOG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2274 50721 22.30 114.75
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 22.30
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_2ZOG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2ZOG-query.scw
PDB file : Tito_Scwrl_2ZOG.pdb: