Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKKVGVGQAHSKIILIGEHAVVYGYPAISLPLLEVEVTCKVVPAESPWRLYEEDTL----SMAVY---------ASL----EYL---NITEACIRCEIDSAIPEKRGMGSSAAISIAAIRAVFDYYQADLPHDVLEILVNRAEMIAHMNPSGL-DAKTCLSD--Q-PIRFIKN-VGFTELEMDLSAYLVIADTGVYGHTRE--A----------IQVVQNK------------GKD-ALPFLHAL---GELTQQAEIAISQKDAEGLGQILSQAHLHL-KEIGVSSLEADSLVETALSHGALGAKMSGGGLGGCIIALVTNLTHAQELAERLEEKGAVQTWIESL
2DEI Chain:A ((1-325))----MIKVKSPGRVNLIGEHTDYTYGYVMPMAINLYT-KIEAEKHG--EVILYSEHFGEERKFSLNDLRKENSWIDYVKGIFWVLKESDYEVGGIKGRVSGNLPLGAGLSSSASFEVGILETLDKLYNLKLDSLSKVLLAKKAENEFVGVPCGILDQFAVVFGREGNVIFLDTHTLDYEYIPFPKDVSILVFYTGVRRELASSEYAERKHIAEESLKILGKGSSKEVREGELSKLPPLHRKFFGYIVRENARVLEVRDALKEGNVEEVGKILTTAHWDLAKNYEVSCKELDFFVERALKLGAYGARLTGAGFGGSAIALVDKEDA-ETIGEEI-------------


General information:
TITO was launched using:
RESULT:

Template: 2DEI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1384 -34114 -24.65 -125.88
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -24.65
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_2DEI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2DEI-query.scw
PDB file : Tito_Scwrl_2DEI.pdb: