Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHTQMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLDKEGNRIVKIDASLPLEQVVETTNAVLFDGMGLAK
4GMD Chain:D ((6-196))---GLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPV--------------LDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAGLPLAEV----------------


General information:
TITO was launched using:
RESULT:

Template: 4GMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 786 -63004 -80.16 -351.97
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain D : 0.78

3D Compatibility (PKB) : -80.16
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.626

(partial model without unconserved sides chains):
PDB file : Tito_4GMD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GMD-query.scw
PDB file : Tito_Scwrl_4GMD.pdb: