Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIRIDIPHHPYDIQIEKGCMAQAGQWLRELWQPQKVVIVTDNHVASLYAEKVKLSLEDAGFQVAVFDFLEGEERKNLTTVQKVYEFLVKQGLTRSDGIVALGGGVVGDLAGFVASTYMRGIHFVQIPTSLTAQVDSSIGGKTGVNTPFAKNMVGTFAQPDGVLIDPLVLETLGKRELIEGMGEVIKYGLI------EDPELW----ALLTGLNGSVESILEHAETLIEHSCQVKRKMVVEDELDNGIRLYLNFGHTIGHAIEATAGYGKVMHGEAVAMGMVQISKIAEEKGLMPAGITQSITEMCQKFGLPVDYENWEVDKLYQALTHDKKARGNTLKLVLVPELGSATIHPV-------SLEEMKDYLVK
1XAH Chain:B ((1-352))MKLQTTYPSNNYPIYVEHGAIKYIGTYLNQFDQS---FLLIDEYVNQYFANKFD----N----VHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFKQILSGYAEVYKHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGIET--------KLDIVVADEKEQGVRKFLNLGHTFGHAVEY---YHKIPHGHAVMVGIIYQFIVANALFDSKHDISHYIQYLIQ-LGYPLD-------TLYQYML--------GVQMVLMRQFGDIVVQHVDQLTLQHACEQLKTY---


General information:
TITO was launched using:
RESULT:

Template: 1XAH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1695 -151276 -89.25 -483.31
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -89.25
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.523

(partial model without unconserved sides chains):
PDB file : Tito_1XAH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XAH-query.scw
PDB file : Tito_Scwrl_1XAH.pdb: