Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKILVFGHQNPDSDAIGSSVAFAYLAKEA-YGLDTEAVALGTPNEETAFVLNYFGVEAPRVITSAKAEGAEQVILTDHNEFQQSVSDIAEVEVYGVVDHHRVANFETASPLYMRLEPVGSASSIVYRMFKEHGVAVPKEIAGLMLSGLISDTLLLKSPTTHPTDKIIAPELAELAGVNLE-EYGLAMLKAGTNLASKSAEELIDIDAKTFELNGNNVRVAQVNTVDIAEVLERQAEIEAAMQAANESNGYSDFVLMITDIV-NSNSEILA-LGANM-DKVEAAFNFKL--ENNHAFLAGAVSRKKQVVPQLTESFNA
1K20 Chain:B ((1-309))-SKILVFGHQNPDSDAIGSSYAFAYLA-REAYGLDTEAVALGEPNEETAFVLDYFGVAAPRVITSAKAEGAEQVILTDHNEFQQSVADIAEVEVYGVVDHHRVANFETANPLYMRLEPVGSASSIVYRMFKEHSVAVSKEIAGLMLSGLISDTLLLKSPTTHPTDKAIAPELAELAGVN-LEEYGLAMLKAGTNLASKSAEELIDIDAKTFELNGNNVRVAQVNTVDIAEVLERQAEIEAAIEKAIADNGYSDFVLMITDIINSNSEILAIGSNMDKVEAAFNFVLENNHAFLAGA-----VSRKKQVVPQLTESFN-


General information:
TITO was launched using:
RESULT:

Template: 1K20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1826 17908 9.81 59.30
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.91

3D Compatibility (PKB) : 9.81
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.584

(partial model without unconserved sides chains):
PDB file : Tito_1K20.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1K20-query.scw
PDB file : Tito_Scwrl_1K20.pdb: