Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNRFKKSKYVIIVFVTVLLVSALLATTYSSTIVTKLGDGISLVDRVVQKPFQWFDSVKSDLAHLTRTYNENESLKKQLYQLEVKSNEVESLKTENEQLRQLLDMKSKLQATKTLAADVIMRSPVSWKQELTLDAGRSKGASENMLAIANGGLIGSVSKVEENSTIVNLLTNTENADKISVKIQHGSTTIYGIIIGYDKENDVLKISQLNSNSDISAGDKVTTGGLGNFNVADIPVGEVVATTHSTDYLTREVTVKLSADTHNVDVIELVGNS
5HYT Chain:A ((9-37))--------------------------------------------------------------------------------ISQESKLINTLTDENEKLREELQQYYALS-------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5HYT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3 586 195.17 20.19
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.51

3D Compatibility (PKB) : 195.17
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.51
QMean score : 0.804

(partial model without unconserved sides chains):
PDB file : Tito_5HYT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HYT-query.scw
PDB file : Tito_Scwrl_5HYT.pdb: