Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIYDGQVADNYMYQDSNQAAIVVSHSTPSLPYPFTMKPNNHSTETNTPPAIDVEKFVAKLESITSRRSKARCARSIRIALESAGADVENHPIAASDWGDTLKKIGYKEINP-A--FDEPQEGDIYIIHRTRNHIYGHIAGYTGSEWVSDFKQSSYDVYKDDNVTYTYYRLG
4F0W Chain:A ((60-132))--------------------------------------------------------------------NKDNASGFVQSVAAELGVPM-PRGNAN-AMVDGL-EQSWTKLASGAEAAQKAAQGFLVIAGLK-GRTYGHVAVVISG---------------------------


General information:
TITO was launched using:
RESULT:

Template: 4F0W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 243 -12683 -52.19 -181.19
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -52.19
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.312

(partial model without unconserved sides chains):
PDB file : Tito_4F0W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F0W-query.scw
PDB file : Tito_Scwrl_4F0W.pdb: